MolNFT v1 · #386526 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (A5IHP1)
A5IHP1: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (A5IHP1)”. 5 pockets (best druggability 0.46). MolNFT v1 #386526 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A5IHP1
- Type
- protein
- Length
- 330 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x09940aBC115bBA85AA2Dacb1e9B9bc559AEa15B7
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- A5IHP1
- Pockets
- 5 · best druggability 0.46
Structure
1 distinct chain · 31% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 330 | 31% helix, 30% strand | A5IHP1 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 152 | 0.46 | 0.76 | 23 | empty |
| 2 | 57 | 0.43 | 0.82 | 15 | empty |
| 3 | 99 | 0.38 | 0.75 | 19 | empty |
| 4 | 65 | 0.35 | 0.78 | 23 | empty |
| 5 | 50 | 0.28 | 0.75 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5IHP1
- Elsewhere: UniProt A5IHP1 · AlphaFold DB A5IHP1
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