MolNFT v1 · #386402 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (P48118)
P48118: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (P48118)”. 4 pockets (best druggability 0.43). MolNFT v1 #386402 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P48118
- Type
- protein
- Length
- 315 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9F605311B7e26e76340423EfAfbE5e2EFc7A0b7C
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- P48118
- Pockets
- 4 · best druggability 0.43
Structure
1 distinct chain · 31% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 315 | 31% helix, 32% strand | P48118 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 120 | 0.43 | 0.76 | 17 | empty |
| 2 | 61 | 0.40 | 0.81 | 16 | empty |
| 3 | 88 | 0.40 | 0.76 | 15 | empty |
| 4 | 50 | 0.27 | 0.74 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P48118
- Elsewhere: UniProt P48118 · AlphaFold DB P48118
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