MolNFT v1 · #386398 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q8SKY1)
Q8SKY1: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q8SKY1)”. 3 pockets (best druggability 0.42). MolNFT v1 #386398 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8SKY1
- Type
- protein
- Length
- 335 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf562F10F7328F0E98474bd83C5fD20dd558c7ed6
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- Q8SKY1
- Pockets
- 3 · best druggability 0.42
Structure
1 distinct chain · 32% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 335 | 32% helix, 31% strand | Q8SKY1 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 91 | 0.42 | 0.78 | 18 | empty |
| 2 | 50 | 0.27 | 0.74 | 10 | empty |
| 3 | 66 | 0.25 | 0.71 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8SKY1
- Elsewhere: UniProt Q8SKY1 · AlphaFold DB Q8SKY1
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