MolNFT v1 · #386321 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (B3PK62)
B3PK62: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (B3PK62)”. 4 pockets (best druggability 0.39). MolNFT v1 #386321 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B3PK62
- Type
- protein
- Length
- 328 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB0528e6B785661f8478d3407b5BBb95a745eCE95
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- B3PK62
- Pockets
- 4 · best druggability 0.39
Structure
1 distinct chain · 30% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 328 | 30% helix, 31% strand | B3PK62 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 73 | 0.39 | 0.79 | 21 | empty |
| 2 | 79 | 0.35 | 0.75 | 15 | empty |
| 3 | 50 | 0.31 | 0.77 | 11 | empty |
| 4 | 59 | 0.26 | 0.72 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B3PK62
- Elsewhere: UniProt B3PK62 · AlphaFold DB B3PK62
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