MolNFT v1 · #386266 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (A4YSL6)
A4YSL6: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (A4YSL6)”. 5 pockets (best druggability 0.49). MolNFT v1 #386266 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A4YSL6
- Type
- protein
- Length
- 343 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Ed09D80e98fE15DE51C9E7a8896AbF1f2365C3e
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- A4YSL6
- Pockets
- 5 · best druggability 0.49
Structure
1 distinct chain · 29% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 343 | 29% helix, 28% strand | A4YSL6 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 222 | 0.49 | 0.74 | 26 | empty |
| 2 | 51 | 0.40 | 0.82 | 18 | empty |
| 3 | 92 | 0.36 | 0.75 | 15 | empty |
| 4 | 51 | 0.32 | 0.77 | 10 | empty |
| 5 | 51 | 0.26 | 0.73 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4YSL6
- Elsewhere: UniProt A4YSL6 · AlphaFold DB A4YSL6
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