MolNFT v1 · #386234 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q5L8D6)
Q5L8D6: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q5L8D6)”. 3 pockets (best druggability 0.50). MolNFT v1 #386234 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5L8D6
- Type
- protein
- Length
- 330 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7B1Fbdc7c90598A502d8d8d5Dd726e011d0DC455
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- Q5L8D6
- Pockets
- 3 · best druggability 0.50
Structure
1 distinct chain · 31% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 330 | 31% helix, 29% strand | Q5L8D6 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 231 | 0.50 | 0.75 | 18 | empty |
| 2 | 88 | 0.37 | 0.76 | 13 | empty |
| 3 | 91 | 0.36 | 0.74 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5L8D6
- Elsewhere: UniProt Q5L8D6 · AlphaFold DB Q5L8D6
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