MolNFT v1 · #386222 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q5P307)
Q5P307: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q5P307)”. 4 pockets (best druggability 0.40). MolNFT v1 #386222 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5P307
- Type
- protein
- Length
- 326 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x362a6d063b1B7E1B6EfD3A9A7CA3612e3FE037AA
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- Q5P307
- Pockets
- 4 · best druggability 0.40
Structure
1 distinct chain · 26% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 326 | 26% helix, 31% strand | Q5P307 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 107 | 0.40 | 0.75 | 15 | empty |
| 2 | 72 | 0.40 | 0.79 | 17 | empty |
| 3 | 55 | 0.35 | 0.79 | 17 | empty |
| 4 | 57 | 0.31 | 0.76 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5P307
- Elsewhere: UniProt Q5P307 · AlphaFold DB Q5P307
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