MolNFT v1 · #386211 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (B8J887)
B8J887: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (B8J887)”. 3 pockets (best druggability 0.44). MolNFT v1 #386211 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B8J887
- Type
- protein
- Length
- 340 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x79a905d858Ce72991FD6E7a9C6498620f42E146D
- Molecule
- DNA-directed RNA polymerase subunit alpha
- UniProt
- B8J887
- Pockets
- 3 · best druggability 0.44
Structure
1 distinct chain · 29% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit alpha | protein | 340 | 29% helix, 28% strand | B8J887 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 132 | 0.44 | 0.76 | 19 | empty |
| 2 | 50 | 0.37 | 0.80 | 19 | empty |
| 3 | 54 | 0.32 | 0.77 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8J887
- Elsewhere: UniProt B8J887 · AlphaFold DB B8J887
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