MolNFT v1 · #385060 · protein
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase III subunit RPC2 (Q54IZ9)
Q54IZ9: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase III subunit RPC2 (Q54IZ9)”. 20 pockets (best druggability 0.81). MolNFT v1 #385060 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q54IZ9
- Type
- protein
- Length
- 1,608 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Ed09D80e98fE15DE51C9E7a8896AbF1f2365C3e
- Molecule
- DNA-directed RNA polymerase III subunit RPC2
- UniProt
- Q54IZ9
- Pockets
- 20 · best druggability 0.81
Structure
1 distinct chain · 30% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase III subunit RPC2 | protein | 1608 | 30% helix, 26% strand | Q54IZ9 |
Pockets
20 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1031 | 0.81 | 0.82 | 129 | empty |
| 2 | 663 | 0.69 | 0.77 | 49 | empty |
| 3 | 404 | 0.65 | 0.79 | 36 | empty |
| 4 | 512 | 0.64 | 0.76 | 49 | empty |
| 5 | 303 | 0.57 | 0.76 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54IZ9
- Elsewhere: UniProt Q54IZ9 · AlphaFold DB Q54IZ9
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