MolNFT v1 · #384775 · protein
AlphaFold monomer V2.0 prediction for RNA polymerase sigma-54 factor 1 (P30332)
P30332: “AlphaFold monomer V2.0 prediction for RNA polymerase sigma-54 factor 1 (P30332)”. 5 pockets (best druggability 0.42). MolNFT v1 #384775 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P30332
- Type
- protein
- Length
- 484 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1141c59a573b52725A219545C456190739feD131
- Molecule
- RNA polymerase sigma-54 factor 1
- UniProt
- P30332
- Pockets
- 5 · best druggability 0.42
Structure
1 distinct chain · 52% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase sigma-54 factor 1 | protein | 484 | 52% helix, 7% strand | P30332 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 150 | 0.42 | 0.74 | 21 | empty |
| 2 | 135 | 0.41 | 0.75 | 17 | empty |
| 3 | 60 | 0.31 | 0.76 | 14 | empty |
| 4 | 76 | 0.31 | 0.73 | 14 | empty |
| 5 | 51 | 0.30 | 0.76 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P30332
- Elsewhere: UniProt P30332 · AlphaFold DB P30332
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