MolNFT v1 · #384774 · protein
AlphaFold monomer V2.0 prediction for RNA polymerase sigma-54 factor (P24219)
P24219: “AlphaFold monomer V2.0 prediction for RNA polymerase sigma-54 factor (P24219)”. 4 pockets (best druggability 0.40). MolNFT v1 #384774 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P24219
- Type
- protein
- Length
- 436 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf87a97E0A4bB354D834857B14296240B167cbe70
- Molecule
- RNA polymerase sigma-54 factor
- UniProt
- P24219
- Pockets
- 4 · best druggability 0.40
Structure
1 distinct chain · 53% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase sigma-54 factor | protein | 436 | 53% helix, 6% strand | P24219 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 131 | 0.40 | 0.74 | 22 | empty |
| 2 | 93 | 0.34 | 0.74 | 16 | empty |
| 3 | 72 | 0.33 | 0.75 | 14 | empty |
| 4 | 56 | 0.28 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P24219
- Elsewhere: UniProt P24219 · AlphaFold DB P24219
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