MolNFT v1 · #384737 · protein

AlphaFold monomer V2.0 prediction for rifampicin monooxygenase (Q5YTV5)

Q5YTV5: “AlphaFold monomer V2.0 prediction for rifampicin monooxygenase (Q5YTV5)”. 3 pockets (best druggability 0.80). MolNFT v1 #384737 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q5YTV5
Type: protein
Length: 473 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x3081dc88808025FB31a57f263f472A39F836d9F7
Molecule: Rifampicin monooxygenase
UniProt: Q5YTV5
Pockets: 3 · best druggability 0.80

Structure

1 distinct chain · 33% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Rifampicin monooxygenase	protein	473	33% helix, 23% strand	Q5YTV5

Pockets

3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1158	0.80	0.82	98	empty
2	120	0.51	0.81	33	empty
3	80	0.37	0.76	16	empty

Compared structures

6C7S · Structure of Rifampicin Monooxygenase with Product Bound · an experimental structure of the same protein · chain A against A, TM-score 1.00
6C7S · Structure of rifampicin monooxygenase with product bound · an experimental structure of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5YTV5
Elsewhere: UniProt Q5YTV5 · AlphaFold DB Q5YTV5

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