MolNFT v1 · #383613 · protein

AlphaFold monomer V2.0 prediction for ribonuclease R (O32231)

O32231: “AlphaFold monomer V2.0 prediction for ribonuclease R (O32231)”. 10 pockets (best druggability 0.76). MolNFT v1 #383613 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: O32231
Type: protein
Length: 779 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x923014Dfc95D087762F5F4fb0e38d445B684DB83
Molecule: Ribonuclease R
UniProt: O32231
Pockets: 10 · best druggability 0.76

Structure

1 distinct chain · 31% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ribonuclease R	protein	779	31% helix, 26% strand	O32231

Pockets

10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	853	0.76	0.80	81	empty
2	226	0.51	0.76	22	empty
3	127	0.50	0.80	28	empty
4	88	0.49	0.83	22	empty
5	155	0.45	0.76	26	empty

Compared structures

8CEC · Rnase R bound to a 30S degradation intermediate (State I - head-turning) · an experimental structure of the same protein · chain A against C, TM-score 0.80
8CDU · Rnase R bound to a 30S degradation intermediate (main state) · an experimental structure of the same protein · chain A against C, TM-score 0.78
8CDV · Rnase R bound to a 30S degradation intermediate (state II) · an experimental structure of the same protein · chain A against C, TM-score 0.50

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O32231
Elsewhere: UniProt O32231 · AlphaFold DB O32231

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