MolNFT v1 · #380679 · protein
AlphaFold monomer V2.0 prediction for ribonuclease D (Q5NPM2)
Q5NPM2: “AlphaFold monomer V2.0 prediction for ribonuclease D (Q5NPM2)”. 3 pockets (best druggability 0.58). MolNFT v1 #380679 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5NPM2
- Type
- protein
- Length
- 390 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- Ribonuclease D
- UniProt
- Q5NPM2
- Pockets
- 3 · best druggability 0.58
Structure
1 distinct chain · 52% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribonuclease D | protein | 390 | 52% helix, 11% strand | Q5NPM2 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 291 | 0.58 | 0.77 | 34 | empty |
| 2 | 86 | 0.39 | 0.77 | 16 | empty |
| 3 | 54 | 0.27 | 0.73 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5NPM2
- Elsewhere: UniProt Q5NPM2 · AlphaFold DB Q5NPM2
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