MolNFT v1 · #379562 · protein
AlphaFold monomer V2.0 prediction for dtdp-4-dehydrorhamnose 3,5-epimerase (Q9HU21)
Q9HU21: “AlphaFold monomer V2.0 prediction for dtdp-4-dehydrorhamnose 3,5-epimerase (Q9HU21)”. 1 pocket (best druggability 0.53). MolNFT v1 #379562 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9HU21
- Type
- protein
- Length
- 181 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- Dtdp-4-dehydrorhamnose 3,5-epimerase
- UniProt
- Q9HU21
- Pockets
- 1 · best druggability 0.53
Structure
1 distinct chain · 10% helix, 44% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Dtdp-4-dehydrorhamnose 3,5-epimerase | protein | 181 | 10% helix, 44% strand | Q9HU21 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 131 | 0.53 | 0.81 | 22 | empty |
Compared structures
- 2IXK · Rmlc P aeruginosa with dtdp-4-keto rhamnnose (the product of the reaction) · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2IXK · RmlC P aeruginosa with dTDP-4-keto rhamnnose (the product of the reaction) · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2IXI · Rmlc P aeruginosa with dtdp-xylose · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2IXI · RmlC P aeruginosa with dTDP-xylose · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2IXH · Rmlc P aeruginosa with dtdp-rhamnose · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2IXH · RmlC P aeruginosa with dTDP-rhamnose · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1RTV · Rmlc (dtdp-6-deoxy-D-xylo-4-hexulose 3,5-epimerase) crystal structure from pseudomonas… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 1RTV · RmlC (dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase) crystal structure from Pseudomonas… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2IXJ · Rmlc P aeruginosa native · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2IXJ · RmlC P aeruginosa native · an experimental structure of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HU21
- Elsewhere: UniProt Q9HU21 · AlphaFold DB Q9HU21
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