MolNFT v1 · #379551 · protein
AlphaFold monomer V2.0 prediction for dtdp-glucose 4,6-dehydratase (P95780)
P95780: “AlphaFold monomer V2.0 prediction for dtdp-glucose 4,6-dehydratase (P95780)”. 2 pockets (best druggability 0.86). MolNFT v1 #379551 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P95780
- Type
- protein
- Length
- 348 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x671C4a5236beCb236f88B9ec9861C01F9D561f42
- Molecule
- Dtdp-glucose 4,6-dehydratase
- UniProt
- P95780
- Pockets
- 2 · best druggability 0.86
Structure
1 distinct chain · 43% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Dtdp-glucose 4,6-dehydratase | protein | 348 | 43% helix, 18% strand | P95780 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 429 | 0.86 | 0.94 | 58 | empty |
| 2 | 52 | 0.24 | 0.72 | 16 | empty |
Compared structures
- 1KER · The crystal structure of dtdp-D-glucose 4,6-dehydratase (rmlb) from streptococcus suis… · an experimental structure of the same protein · chain A against B, TM-score 1.00
- 1KER · The crystal structure of dTDP-D-glucose 4,6-dehydratase (RmlB) from Streptococcus suis… · an experimental structure of the same protein · chain A against B, TM-score 1.00
- 1KET · The crystal structure of dtdp-D-glucose 4,6-dehydratase (rmlb) from streptococcus suis… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1KET · The crystal structure of dTDP-D-glucose 4,6-dehydratase (RmlB) from Streptococcus suis… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1KEP · The crystal structure of dtdp-D-glucose 4,6-dehydratase (rmlb) from streptococcus suis… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1KEP · The crystal structure of dTDP-D-glucose 4,6-dehydratase (RmlB) from Streptococcus suis… · an experimental structure of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P95780
- Elsewhere: UniProt P95780 · AlphaFold DB P95780
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