MolNFT v1 · #379163 · protein

AlphaFold monomer V2.0 prediction for 54S ribosomal protein L17, mitochondrial (P36528)

P36528: “AlphaFold monomer V2.0 prediction for 54S ribosomal protein L17, mitochondrial (P36528)”. 2 pockets (best druggability 0.48). MolNFT v1 #379163 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: P36528
Type: protein
Length: 281 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
Molecule: 54S ribosomal protein L17, mitochondrial
UniProt: P36528
Pockets: 2 · best druggability 0.48

Structure

1 distinct chain · 26% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	54S ribosomal protein L17, mitochondrial	protein	281	26% helix, 20% strand	P36528

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	191	0.48	0.75	31	empty
2	130	0.45	0.77	24	empty

Compared structures

5MRE · Structure of the yeast mitochondrial ribosome - Class B · an experimental structure of the same protein · chain A against 6, TM-score 0.81
5MRC · Structure of the yeast mitochondrial ribosome - Class A · an experimental structure of the same protein · chain A against 6, TM-score 0.81
5MRF · Structure of the yeast mitochondrial ribosome - Class C · an experimental structure of the same protein · chain A against 6, TM-score 0.81
3J6B · Structure of the yeast mitochondrial large ribosomal subunit · an experimental structure of the same protein · chain A against 6, TM-score 0.71

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P36528
Elsewhere: UniProt P36528 · AlphaFold DB P36528

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