AlphaFold monomer V2.0 prediction for 39S ribosomal protein L1, mitochondrial (Q9BYD6)

Structure

1 distinct chain · 30% helix, 16% strand (DSSP).

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 7QI5 · Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A… · an experimental structure of the same protein · chain A against z, TM-score 0.66
• 8ANY · Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs… · an experimental structure of the same protein · chain A against z, TM-score 0.66
• 7QI6 · Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution · an experimental structure of the same protein · chain A against z, TM-score 0.66
• 7A5K · Structure of the human mitoribosome in the post translocation state bound to mtEF-G1 · an experimental structure of the same protein · chain A against n, TM-score 0.52
• 8OIR · 55S human mitochondrial ribosome with mtRF1 and P-site tRNA · an experimental structure of the same protein · chain A against Bj, TM-score 0.43
• 8OIT · 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA · an experimental structure of the same protein · chain A against Bj, TM-score 0.43
• 7QI4 · Human mitochondrial ribosome at 2.2 A resolution (bound to partly built tRNAs and mRNA) · an experimental structure of the same protein · chain A against z, TM-score 0.42

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q9BYD6
• Elsewhere: UniProt Q9BYD6 · AlphaFold DB Q9BYD6