MolNFT v1 · #378950 · protein
AlphaFold monomer V2.0 prediction for ribosomal large subunit pseudouridine synthase D (Q9JVB6)
Q9JVB6: “AlphaFold monomer V2.0 prediction for ribosomal large subunit pseudouridine synthase D (Q9JVB6)”. 3 pockets (best druggability 0.71). MolNFT v1 #378950 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9JVB6
- Type
- protein
- Length
- 374 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3298b100681D3A2372Bba3b2f282750dD71629B9
- Molecule
- Ribosomal large subunit pseudouridine synthase D
- UniProt
- Q9JVB6
- Pockets
- 3 · best druggability 0.71
Structure
1 distinct chain · 24% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal large subunit pseudouridine synthase D | protein | 374 | 24% helix, 25% strand | Q9JVB6 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 666 | 0.71 | 0.78 | 59 | empty |
| 2 | 291 | 0.55 | 0.76 | 36 | empty |
| 3 | 69 | 0.34 | 0.76 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9JVB6
- Elsewhere: UniProt Q9JVB6 · AlphaFold DB Q9JVB6
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