MolNFT v1 · #377881 · protein
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase M (Q0VP88)
Q0VP88: “AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase M (Q0VP88)”. 4 pockets (best druggability 0.61). MolNFT v1 #377881 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q0VP88
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x55D1b3b7466a56428E3285E032e623B3B5b7D909
- Molecule
- Ribosomal RNA large subunit methyltransferase M
- UniProt
- Q0VP88
- Pockets
- 4 · best druggability 0.61
Structure
1 distinct chain · 33% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase M | protein | 353 | 33% helix, 27% strand | Q0VP88 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 230 | 0.61 | 0.81 | 33 | empty |
| 2 | 53 | 0.59 | 0.92 | 16 | empty |
| 3 | 107 | 0.46 | 0.79 | 18 | empty |
| 4 | 134 | 0.44 | 0.76 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0VP88
- Elsewhere: UniProt Q0VP88 · AlphaFold DB Q0VP88
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