MolNFT v1 · #376321 · protein
AlphaFold monomer V2.0 prediction for 23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd (Q8Z446)
Q8Z446: “AlphaFold monomer V2.0 prediction for 23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd (Q8Z446)”. 2 pockets (best druggability 0.64). MolNFT v1 #376321 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8Z446
- Type
- protein
- Length
- 431 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x362a6d063b1B7E1B6EfD3A9A7CA3612e3FE037AA
- Molecule
- 23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd
- UniProt
- Q8Z446
- Pockets
- 2 · best druggability 0.64
Structure
1 distinct chain · 26% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd | protein | 431 | 26% helix, 32% strand | Q8Z446 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 404 | 0.64 | 0.78 | 63 | empty |
| 2 | 57 | 0.26 | 0.72 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8Z446
- Elsewhere: UniProt Q8Z446 · AlphaFold DB Q8Z446
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