MolNFT v1 · #376213 · protein
AlphaFold monomer V2.0 prediction for 23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd (B0V5N2)
B0V5N2: “AlphaFold monomer V2.0 prediction for 23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd (B0V5N2)”. 2 pockets (best druggability 0.69). MolNFT v1 #376213 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B0V5N2
- Type
- protein
- Length
- 463 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7B7AB9CFf896c6Dfc7d6EbD15e1E38bb0c14f53B
- Molecule
- 23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd
- UniProt
- B0V5N2
- Pockets
- 2 · best druggability 0.69
Structure
1 distinct chain · 27% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd | protein | 463 | 27% helix, 30% strand | B0V5N2 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 508 | 0.69 | 0.79 | 71 | empty |
| 2 | 62 | 0.30 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0V5N2
- Elsewhere: UniProt B0V5N2 · AlphaFold DB B0V5N2
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