MolNFT v1 · #374116 · protein

AlphaFold monomer V2.0 prediction for 60S ribosomal protein L6 (P0DJ56)

P0DJ56: “AlphaFold monomer V2.0 prediction for 60S ribosomal protein L6 (P0DJ56)”. 1 pocket (best druggability 0.42). MolNFT v1 #374116 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: P0DJ56
Type: protein
Length: 191 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x7c75F0f7d6d136A2b8D4C6C6e9b3D8a697949DF1
Molecule: 60S ribosomal protein L6
UniProt: P0DJ56
Pockets: 1 · best druggability 0.42

Structure

1 distinct chain · 25% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	60S ribosomal protein L6	protein	191	25% helix, 17% strand	P0DJ56

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	132	0.42	0.75	16	empty

Compared structures

4V8P · T.thermophila 60S ribosomal subunit in complex with initiation factor 6. · an experimental structure of the same protein · chain A against AE, TM-score 0.83

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0DJ56
Elsewhere: UniProt P0DJ56 · AlphaFold DB P0DJ56

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