AlphaFold monomer V2.0 prediction for 60S ribosomal protein L6 (Q02878)

Structure

1 distinct chain · 16% helix, 16% strand (DSSP).

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 6XA1 · Structure of a drug-like compound stalled human translation termination complex · an experimental structure of the same protein · chain A against LE, TM-score 0.80
• 8IFE · Arbekacin-added human 80S ribosome · an experimental structure of the same protein · chain A against 1H, TM-score 0.80
• 6Z6N · Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1) · an experimental structure of the same protein · chain A against LE, TM-score 0.80
• 6QZP · High-resolution cryo-EM structure of the human 80S ribosome · an experimental structure of the same protein · chain A against LE, TM-score 0.79
• 6Z6M · Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1 · an experimental structure of the same protein · chain A against LE, TM-score 0.79
• 6Y6X · Tetracenomycin X bound to the human ribosome · an experimental structure of the same protein · chain A against LE, TM-score 0.79
• 6ZMO · SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complex · an experimental structure of the same protein · chain A against LE, TM-score 0.79
• 6Z6L · Cryo-EM structure of human CCDC124 bound to 80S ribosomes · an experimental structure of the same protein · chain A against LE, TM-score 0.79
• 8XSX · Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2 · an experimental structure of the same protein · chain A against LE, TM-score 0.79
• 8IFD · Dibekacin-added human 80S ribosome · an experimental structure of the same protein · chain A against 1H, TM-score 0.79
• 6ZMI · SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complex · an experimental structure of the same protein · chain A against LE, TM-score 0.79
• 8QOI · Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical… · an experimental structure of the same protein · chain A against LE, TM-score 0.79

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q02878
• Elsewhere: UniProt Q02878 · AlphaFold DB Q02878