MolNFT v1 · #373223 · protein

AlphaFold monomer V2.0 prediction for 50S ribosomal protein L5 (Q2YYK9)

Q2YYK9: “AlphaFold monomer V2.0 prediction for 50S ribosomal protein L5 (Q2YYK9)”. 1 pocket (best druggability 0.39). MolNFT v1 #373223 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q2YYK9
Type: protein
Length: 179 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xB35df660264f41795De49C83276C108A4ba91ADE
Molecule: 50S ribosomal protein L5
UniProt: Q2YYK9
Pockets: 1 · best druggability 0.39

Structure

1 distinct chain · 43% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	50S ribosomal protein L5	protein	179	43% helix, 21% strand	Q2YYK9

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	108	0.39	0.75	20	empty

Compared structures

6FXC · The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus… · an experimental structure of the same protein · chain A against AF, TM-score 0.90

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q2YYK9
Elsewhere: UniProt Q2YYK9 · AlphaFold DB Q2YYK9

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