MolNFT v1 · #373033 · protein
AlphaFold monomer V2.0 prediction for 60S ribosomal protein L5 (O59953)
O59953: “AlphaFold monomer V2.0 prediction for 60S ribosomal protein L5 (O59953)”. 2 pockets (best druggability 0.32). MolNFT v1 #373033 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- O59953
- Type
- protein
- Length
- 301 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x50B22156fFFa386E37890a984C292bcba4d97D5e
- Molecule
- 60S ribosomal protein L5
- UniProt
- O59953
- Pockets
- 2 · best druggability 0.32
Structure
1 distinct chain · 45% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 60S ribosomal protein L5 | protein | 301 | 45% helix, 12% strand | O59953 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 54 | 0.32 | 0.77 | 16 | empty |
| 2 | 65 | 0.27 | 0.72 | 15 | empty |
Compared structures
- 7R81 · Structure of the translating Neurospora crassa ribosome arrested by cycloheximide · an experimental structure of the same protein · chain A against G1, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O59953
- Elsewhere: UniProt O59953 · AlphaFold DB O59953
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