MolNFT v1 · #372868 · protein

AlphaFold monomer V2.0 prediction for 50S ribosomal protein L5 (P08895)

P08895: “AlphaFold monomer V2.0 prediction for 50S ribosomal protein L5 (P08895)”. 1 pocket (best druggability 0.40). MolNFT v1 #372868 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: P08895
Type: protein
Length: 179 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x8F9c7747101075C570E34CAd4Ed2A4C01e9b2C28
Molecule: 50S ribosomal protein L5
UniProt: P08895
Pockets: 1 · best druggability 0.40

Structure

1 distinct chain · 44% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	50S ribosomal protein L5	protein	179	44% helix, 21% strand	P08895

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	86	0.40	0.77	15	empty

Compared structures

1IQ4 · 5S-rRNA binding ribosomal protein L5 from bacillus stearothermophilus · an experimental structure of the same protein · chain A against A, TM-score 0.94
1IQ4 · 5S-rRNA binding ribosomal protein L5 from bacillus stearothermophilus · an experimental structure of the same protein · chain A against A, TM-score 0.94

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P08895
Elsewhere: UniProt P08895 · AlphaFold DB P08895

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