MolNFT v1 · #372795 · protein
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L5 (Q9RXJ0)
Q9RXJ0: “AlphaFold monomer V2.0 prediction for 50S ribosomal protein L5 (Q9RXJ0)”. 1 pocket (best druggability 0.34). MolNFT v1 #372795 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9RXJ0
- Type
- protein
- Length
- 180 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6E9BbDc1b6fC55C680D00647f59F9f8fdC912a52
- Molecule
- 50S ribosomal protein L5
- UniProt
- Q9RXJ0
- Pockets
- 1 · best druggability 0.34
Structure
1 distinct chain · 39% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L5 | protein | 180 | 39% helix, 21% strand | Q9RXJ0 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.34 | 0.74 | 17 | empty |
Compared structures
- 5DM6 · Crystal structure of the 50S ribosomal subunit from Deinococcus radiodurans · an experimental structure of the same protein · chain A against D, TM-score 0.92
- 5DM6 · Crystal structure of the 50S ribosomal subunit from deinococcus radiodurans · an experimental structure of the same protein · chain A against D, TM-score 0.92
- 4IO9 · Crystal structure of compound 4D bound to large ribosomal subunit (50S) from deinococcus… · an experimental structure of the same protein · chain A against D, TM-score 0.92
- 4IO9 · Crystal structure of compound 4d bound to large ribosomal subunit (50S) from Deinococcus… · an experimental structure of the same protein · chain A against D, TM-score 0.92
- 4IOC · Crystal structure of compound 4F bound to large ribosomal subunit (50S) from deinococcus… · an experimental structure of the same protein · chain A against D, TM-score 0.92
- 4IOC · Crystal structure of compound 4f bound to large ribosomal subunit (50S) from Deinococcus… · an experimental structure of the same protein · chain A against D, TM-score 0.92
- 4IOA · Crystal structure of compound 4E bound to large ribosomal subunit (50S) from deinococcus… · an experimental structure of the same protein · chain A against D, TM-score 0.92
- 4IOA · Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus… · an experimental structure of the same protein · chain A against D, TM-score 0.92
- 5DM7 · Crystal structure of the 50S ribosomal subunit from deinococcus radiodurans in complex… · an experimental structure of the same protein · chain A against D, TM-score 0.92
- 5DM7 · Crystal structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex… · an experimental structure of the same protein · chain A against D, TM-score 0.92
- 7A0R · 50S deinococcus radiodurans ribosome bounded with mycinamicin I · an experimental structure of the same protein · chain A against D, TM-score 0.92
- 7A0R · 50S Deinococcus radiodurans ribosome bounded with mycinamicin I · an experimental structure of the same protein · chain A against D, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9RXJ0
- Elsewhere: UniProt Q9RXJ0 · AlphaFold DB Q9RXJ0
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