MolNFT v1 · #371724 · protein
AlphaFold monomer V2.0 prediction for 60S ribosomal protein L4-B (P49626)
P49626: “AlphaFold monomer V2.0 prediction for 60S ribosomal protein L4-B (P49626)”. 1 pocket (best druggability 0.35). MolNFT v1 #371724 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P49626
- Type
- protein
- Length
- 362 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF1437035F7890bd590E2820a667B75cf387314Ef
- Molecule
- 60S ribosomal protein L4-B
- UniProt
- P49626
- Pockets
- 1 · best druggability 0.35
Structure
1 distinct chain · 36% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 60S ribosomal protein L4-B | protein | 362 | 36% helix, 10% strand | P49626 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 81 | 0.35 | 0.75 | 16 | empty |
Compared structures
- 2WW9 · Cryo-EM structure of the active yeast Ssh1 complex bound to the yeast 80S ribosome · an experimental structure of the same protein · chain A against H, TM-score 0.64
- 2WW9 · Cryo-EM structure of the active yeast SSH1 complex bound to the yeast 80S ribosome · an experimental structure of the same protein · chain A against H, TM-score 0.64
- 2WWA · Cryo-EM structure of idle yeast Ssh1 complex bound to the yeast 80S ribosome · an experimental structure of the same protein · chain A against H, TM-score 0.64
- 2WWA · Cryo-EM structure of idle yeast SSH1 complex bound to the yeast 80S ribosome · an experimental structure of the same protein · chain A against H, TM-score 0.64
- 4V4B · Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking… · an experimental structure of the same protein · chain A against BD, TM-score 0.62
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P49626
- Elsewhere: UniProt P49626 · AlphaFold DB P49626
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