MolNFT v1 · #371267 · protein
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L3 (Q9HWD5)
Q9HWD5: “AlphaFold monomer V2.0 prediction for 50S ribosomal protein L3 (Q9HWD5)”. 1 pocket (best druggability 0.32). MolNFT v1 #371267 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9HWD5
- Type
- protein
- Length
- 211 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- 50S ribosomal protein L3
- UniProt
- Q9HWD5
- Pockets
- 1 · best druggability 0.32
Structure
1 distinct chain · 11% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L3 | protein | 211 | 11% helix, 36% strand | Q9HWD5 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 55 | 0.32 | 0.77 | 15 | empty |
Compared structures
- 7UNW · Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) · an experimental structure of the same protein · chain A against D, TM-score 0.97
- 7UNU · Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP… · an experimental structure of the same protein · chain A against D, TM-score 0.97
- 7UNV · Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) · an experimental structure of the same protein · chain A against D, TM-score 0.97
- 7UNR · Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP… · an experimental structure of the same protein · chain A against D, TM-score 0.97
- 8CD1 · 70S-PHIKZ014 · an experimental structure of the same protein · chain A against D, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HWD5
- Elsewhere: UniProt Q9HWD5 · AlphaFold DB Q9HWD5
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