MolNFT v1 · #371137 · protein
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L3 (A6VHD2)
A6VHD2: “AlphaFold monomer V2.0 prediction for 50S ribosomal protein L3 (A6VHD2)”. 5 pockets (best druggability 0.53). MolNFT v1 #371137 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A6VHD2
- Type
- protein
- Length
- 334 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3D9EEbaa6aF80C13d2e518c2A0713C22e395C02D
- Molecule
- 50S ribosomal protein L3
- UniProt
- A6VHD2
- Pockets
- 5 · best druggability 0.53
Structure
1 distinct chain · 14% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L3 | protein | 334 | 14% helix, 34% strand | A6VHD2 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 265 | 0.53 | 0.76 | 39 | empty |
| 2 | 145 | 0.43 | 0.75 | 20 | empty |
| 3 | 78 | 0.38 | 0.78 | 21 | empty |
| 4 | 90 | 0.34 | 0.74 | 13 | empty |
| 5 | 81 | 0.34 | 0.75 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6VHD2
- Elsewhere: UniProt A6VHD2 · AlphaFold DB A6VHD2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.