MolNFT v1 · #354382 · protein
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L18AE (P38613)
P38613: “AlphaFold monomer V2.0 prediction for 50S ribosomal protein L18AE (P38613)”. 1 pocket (best druggability 0.37). MolNFT v1 #354382 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P38613
- Type
- protein
- Length
- 86 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xaa53776A41fB2e67da75A96E8a53746b6874aAB4
- Molecule
- 50S ribosomal protein L18AE
- UniProt
- P38613
- Pockets
- 1 · best druggability 0.37
Structure
1 distinct chain · 35% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L18AE | protein | 86 | 35% helix, 36% strand | P38613 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 75 | 0.37 | 0.76 | 16 | empty |
Compared structures
- 8HKU · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against ALX0, TM-score 0.74
- 8HL1 · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against ALX0, TM-score 0.72
- 8HL4 · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against ALX0, TM-score 0.71
- 8HL3 · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against ALX0, TM-score 0.71
- 8HKV · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against ALX0, TM-score 0.71
- 8HL2 · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against ALX0, TM-score 0.71
- 8HL5 · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against ALX0, TM-score 0.68
- 8HKZ · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against ALX0, TM-score 0.65
- 8HKY · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against ALX0, TM-score 0.61
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P38613
- Elsewhere: UniProt P38613 · AlphaFold DB P38613
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