MolNFT v1 · #354349 · protein
AlphaFold monomer V2.0 prediction for 60S ribosomal protein L18A (Q02543)
Q02543: “AlphaFold monomer V2.0 prediction for 60S ribosomal protein L18A (Q02543)”. 1 pocket (best druggability 0.32). MolNFT v1 #354349 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q02543
- Type
- protein
- Length
- 176 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- 60S ribosomal protein L18A
- UniProt
- Q02543
- Pockets
- 1 · best druggability 0.32
Structure
1 distinct chain · 22% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 60S ribosomal protein L18A | protein | 176 | 22% helix, 32% strand | Q02543 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 67 | 0.32 | 0.75 | 12 | empty |
Compared structures
- 8G5Y · mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state) · an experimental structure of the same protein · chain A against LS, TM-score 0.99
- 8G60 · mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state) · an experimental structure of the same protein · chain A against LS, TM-score 0.99
- 8A3D · Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound · an experimental structure of the same protein · chain A against M, TM-score 0.99
- 8G5Z · mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state) · an experimental structure of the same protein · chain A against LS, TM-score 0.99
- 8G6J · mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2) · an experimental structure of the same protein · chain A against LS, TM-score 0.99
- 8GLP · mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus… · an experimental structure of the same protein · chain A against LS, TM-score 0.99
- 8G61 · mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state) · an experimental structure of the same protein · chain A against LS, TM-score 0.99
- 9C3H · Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site. · an experimental structure of the same protein · chain A against LS, TM-score 0.99
- 9GMO · eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16 · an experimental structure of the same protein · chain A against M, TM-score 0.99
- 7XNX · High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells · an experimental structure of the same protein · chain A against LS, TM-score 0.99
- 7OW7 · EIF6-bound large subunit of the human ribosome · an experimental structure of the same protein · chain A against M, TM-score 0.99
- 7XNY · High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cells · an experimental structure of the same protein · chain A against LS, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q02543
- Elsewhere: UniProt Q02543 · AlphaFold DB Q02543
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