MolNFT v1 · #352688 · protein
AlphaFold monomer V2.0 prediction for 60S ribosomal protein L16-B (O42991)
O42991: “AlphaFold monomer V2.0 prediction for 60S ribosomal protein L16-B (O42991)”. 2 pockets (best druggability 0.40). MolNFT v1 #352688 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- O42991
- Type
- protein
- Length
- 197 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe224E0Ef7bE7cF7f0C1043dd5Ab8882d57b81d32
- Molecule
- 60S ribosomal protein L16-B
- UniProt
- O42991
- Pockets
- 2 · best druggability 0.40
Structure
1 distinct chain · 54% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 60S ribosomal protein L16-B | protein | 197 | 54% helix, 11% strand | O42991 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 122 | 0.40 | 0.74 | 14 | empty |
| 2 | 53 | 0.31 | 0.76 | 14 | empty |
Compared structures
- 8EUI · Ytm1 associated nascent 60S ribosome (-fkbp39) State 3 · an experimental structure of the same protein · chain A against O, TM-score 0.98
- 8EUG · Ytm1 associated nascent 60S ribosome State 3 · an experimental structure of the same protein · chain A against O, TM-score 0.98
- 8ETJ · Fkbp39 associated 60S nascent ribosome State 2 · an experimental structure of the same protein · chain A against O, TM-score 0.98
- 8ETC · Fkbp39 associated nascent 60S ribosome State 4 · an experimental structure of the same protein · chain A against O, TM-score 0.97
- 8ESQ · Ytm1 associated nascent 60S ribosome State 2 · an experimental structure of the same protein · chain A against O, TM-score 0.97
- 8ESR · Ytm1 associated nascent 60S ribosome (-fkbp39) State 2 · an experimental structure of the same protein · chain A against O, TM-score 0.97
- 8ETI · Fkbp39 associated 60S nascent ribosome State 1 · an experimental structure of the same protein · chain A against O, TM-score 0.96
- 8ETG · Fkbp39 associated 60S nascent ribosome State 3 · an experimental structure of the same protein · chain A against O, TM-score 0.93
- 8EUY · Ytm1 associated nascent 60S ribosome (-fkbp39) State 1A · an experimental structure of the same protein · chain A against O, TM-score 0.92
- 8EV3 · Ytm1 associated 60S nascent ribosome (-Fkbp39) State 1B · an experimental structure of the same protein · chain A against O, TM-score 0.92
- 8ETH · Ytm1 associated 60S nascent ribosome State 1B · an experimental structure of the same protein · chain A against O, TM-score 0.91
- 8EUP · Ytm1 associated 60S nascent ribosome State 1A · an experimental structure of the same protein · chain A against O, TM-score 0.89
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O42991
- Elsewhere: UniProt O42991 · AlphaFold DB O42991
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