MolNFT v1 · #348301 · protein
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L5, chloroplastic (P82192)
P82192: “AlphaFold monomer V2.0 prediction for 50S ribosomal protein L5, chloroplastic (P82192)”. 2 pockets (best druggability 0.43). MolNFT v1 #348301 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P82192
- Type
- protein
- Length
- 258 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9073C46348542FfE4327c3F363F9B51B22058e75
- Molecule
- 50S ribosomal protein L5, chloroplastic
- UniProt
- P82192
- Pockets
- 2 · best druggability 0.43
Structure
1 distinct chain · 29% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L5, chloroplastic | protein | 258 | 29% helix, 15% strand | P82192 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 125 | 0.43 | 0.76 | 20 | empty |
| 2 | 74 | 0.35 | 0.76 | 24 | empty |
Compared structures
- 5MLC · Cryo-EM structure of the spinach chloroplast ribosome reveals the location of… · an experimental structure of the same protein · chain A against G, TM-score 0.64
- 5MLC · Cryo-EM structure of the spinach chloroplast ribosome reveals the location of… · an experimental structure of the same protein · chain A against G, TM-score 0.64
- 5H1S · Structure of the large subunit of the chloro-ribosome · an experimental structure of the same protein · chain A against H, TM-score 0.63
- 5H1S · Structure of the large subunit of the chloro-ribosome · an experimental structure of the same protein · chain A against H, TM-score 0.63
- 5X8T · Structure of the 50S large subunit of chloroplast ribosome from spinach · an experimental structure of the same protein · chain A against F, TM-score 0.63
- 5X8T · Structure of the 50S large subunit of chloroplast ribosome from spinach · an experimental structure of the same protein · chain A against F, TM-score 0.63
- 4V61 · Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the… · an experimental structure of the same protein · chain A against BH, TM-score 0.63
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P82192
- Elsewhere: UniProt P82192 · AlphaFold DB P82192
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.