MolNFT v1 · #345038 · protein
AlphaFold monomer V2.0 prediction for ribosomal protein S12 methylthiotransferase rimo (A1VQ18)
A1VQ18: “AlphaFold monomer V2.0 prediction for ribosomal protein S12 methylthiotransferase rimo (A1VQ18)”. 4 pockets (best druggability 0.76). MolNFT v1 #345038 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A1VQ18
- Type
- protein
- Length
- 461 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7c75F0f7d6d136A2b8D4C6C6e9b3D8a697949DF1
- Molecule
- Ribosomal protein S12 methylthiotransferase rimo
- UniProt
- A1VQ18
- Pockets
- 4 · best druggability 0.76
Structure
1 distinct chain · 35% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal protein S12 methylthiotransferase rimo | protein | 461 | 35% helix, 21% strand | A1VQ18 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 573 | 0.76 | 0.83 | 63 | empty |
| 2 | 51 | 0.54 | 0.89 | 17 | empty |
| 3 | 124 | 0.50 | 0.81 | 20 | empty |
| 4 | 71 | 0.32 | 0.75 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1VQ18
- Elsewhere: UniProt A1VQ18 · AlphaFold DB A1VQ18
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