MolNFT v1 · #344991 · protein
AlphaFold monomer V2.0 prediction for ribosomal protein S12 methylthiotransferase rimo (Q04ZD0)
Q04ZD0: “AlphaFold monomer V2.0 prediction for ribosomal protein S12 methylthiotransferase rimo (Q04ZD0)”. 4 pockets (best druggability 0.76). MolNFT v1 #344991 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q04ZD0
- Type
- protein
- Length
- 439 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- Ribosomal protein S12 methylthiotransferase rimo
- UniProt
- Q04ZD0
- Pockets
- 4 · best druggability 0.76
Structure
1 distinct chain · 41% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal protein S12 methylthiotransferase rimo | protein | 439 | 41% helix, 23% strand | Q04ZD0 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 474 | 0.76 | 0.84 | 51 | empty |
| 2 | 255 | 0.59 | 0.79 | 30 | empty |
| 3 | 82 | 0.38 | 0.77 | 15 | empty |
| 4 | 62 | 0.31 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q04ZD0
- Elsewhere: UniProt Q04ZD0 · AlphaFold DB Q04ZD0
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