MolNFT v1 · #344881 · protein
AlphaFold monomer V2.0 prediction for ribosomal protein S12 methylthiotransferase rimo (B5ED60)
B5ED60: “AlphaFold monomer V2.0 prediction for ribosomal protein S12 methylthiotransferase rimo (B5ED60)”. 4 pockets (best druggability 0.77). MolNFT v1 #344881 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B5ED60
- Type
- protein
- Length
- 448 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0E4ca55ef0a74c0bbB9A3D5a6ddfbF71673A6a7E
- Molecule
- Ribosomal protein S12 methylthiotransferase rimo
- UniProt
- B5ED60
- Pockets
- 4 · best druggability 0.77
Structure
1 distinct chain · 36% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal protein S12 methylthiotransferase rimo | protein | 448 | 36% helix, 23% strand | B5ED60 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 517 | 0.77 | 0.84 | 52 | empty |
| 2 | 66 | 0.34 | 0.76 | 15 | empty |
| 3 | 68 | 0.31 | 0.74 | 15 | empty |
| 4 | 61 | 0.29 | 0.74 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5ED60
- Elsewhere: UniProt B5ED60 · AlphaFold DB B5ED60
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