MolNFT v1 · #343731 · protein
AlphaFold monomer V2.0 prediction for riboflavin kinase (Q60365)
Q60365: “AlphaFold monomer V2.0 prediction for riboflavin kinase (Q60365)”. 1 pocket (best druggability 0.64). MolNFT v1 #343731 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q60365
- Type
- protein
- Length
- 132 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb3c0C983Fc44934AC589D7131C08a72544EBB92E
- Molecule
- Riboflavin kinase
- UniProt
- Q60365
- Pockets
- 1 · best druggability 0.64
Structure
1 distinct chain · 19% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Riboflavin kinase | protein | 132 | 19% helix, 43% strand | Q60365 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 300 | 0.64 | 0.80 | 49 | empty |
Compared structures
- 2OYN · Crystal structure of cdp-bound protein MJ0056 from methanococcus jannaschii, pfam DUF120 · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 2OYN · Crystal structure of CDP-bound protein MJ0056 from Methanococcus jannaschii, Pfam DUF120 · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 2VBT · Riboflavin kinase Mj0056 from Methanocaldococcus jannaschii in complex with CDP and PO4 · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 2VBT · Riboflavin kinase MJ0056 from methanocaldococcus jannaschii in complex with cdp and PO4 · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 2VBU · Riboflavin kinase MJ0056 from methanocaldococcus jannaschii in complex with cdp · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 2VBU · Riboflavin kinase Mj0056 from Methanocaldococcus jannaschii in complex with CDP · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 2VBV · Riboflavin kinase Mj0056 from Methanocaldococcus jannaschii in complex with CDP and FMN · an experimental structure of the same protein · chain A against B, TM-score 0.94
- 2VBV · Riboflavin kinase MJ0056 from methanocaldococcus jannaschii in complex with cdp and FMN · an experimental structure of the same protein · chain A against B, TM-score 0.94
- 2VBS · Riboflavin kinase MJ0056 from methanocaldococcus jannaschii in complex with PO4 · an experimental structure of the same protein · chain A against A, TM-score 0.91
- 2VBS · Riboflavin kinase Mj0056 from Methanocaldococcus jannaschii in complex with PO4 · an experimental structure of the same protein · chain A against A, TM-score 0.91
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q60365
- Elsewhere: UniProt Q60365 · AlphaFold DB Q60365
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