MolNFT v1 · #343648 · protein

AlphaFold monomer V2.0 prediction for synembryn-a (Q80ZG1)

Q80ZG1: “AlphaFold monomer V2.0 prediction for synembryn-a (Q80ZG1)”. 5 pockets (best druggability 0.44). MolNFT v1 #343648 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q80ZG1
Type: protein
Length: 529 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x5e58272ea25a05e06901A2eAe9f63939b344e0c6
Molecule: Synembryn-a
UniProt: Q80ZG1
Pockets: 5 · best druggability 0.44

Structure

1 distinct chain · 62% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Synembryn-a	protein	529	62% helix, 3% strand	Q80ZG1

Pockets

5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	153	0.44	0.75	19	empty
2	139	0.39	0.74	25	empty
3	56	0.32	0.77	15	empty
4	57	0.30	0.76	14	empty
5	54	0.26	0.73	15	empty

Compared structures

8AHY · X-ray structure of human NCS-1 bound to Ric-8A · an experimental structure of the same protein · chain A against P, TM-score 0.05
8ALM · X-ray structure of human NCS-1 bound to Ric-8A · an experimental structure of the same protein · chain A against P, TM-score 0.05

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q80ZG1
Elsewhere: UniProt Q80ZG1 · AlphaFold DB Q80ZG1

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