MolNFT v1 · #342639 · protein
AlphaFold monomer V2.0 prediction for probable rhamnogalacturonase B (Q4WV23)
Q4WV23: “AlphaFold monomer V2.0 prediction for probable rhamnogalacturonase B (Q4WV23)”. 2 pockets (best druggability 0.56). MolNFT v1 #342639 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q4WV23
- Type
- protein
- Length
- 521 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4Ef77Afb5a3D9F41c95Be3227D1CC986CCb61835
- Molecule
- Probable rhamnogalacturonase B
- UniProt
- Q4WV23
- Pockets
- 2 · best druggability 0.56
Structure
1 distinct chain · 8% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable rhamnogalacturonase B | protein | 521 | 8% helix, 40% strand | Q4WV23 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 253 | 0.56 | 0.78 | 40 | empty |
| 2 | 141 | 0.41 | 0.75 | 21 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4WV23
- Elsewhere: UniProt Q4WV23 · AlphaFold DB Q4WV23
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