MolNFT v1 · #342077 · protein
AlphaFold monomer V2.0 prediction for rhamnulokinase (Q3YV72)
Q3YV72: “AlphaFold monomer V2.0 prediction for rhamnulokinase (Q3YV72)”. 5 pockets (best druggability 0.74). MolNFT v1 #342077 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q3YV72
- Type
- protein
- Length
- 489 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x74fa9b3471789AeF6382E089eCD80c4a16336589
- Molecule
- Rhamnulokinase
- UniProt
- Q3YV72
- Pockets
- 5 · best druggability 0.74
Structure
1 distinct chain · 43% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rhamnulokinase | protein | 489 | 43% helix, 21% strand | Q3YV72 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 458 | 0.74 | 0.83 | 58 | empty |
| 2 | 185 | 0.46 | 0.75 | 36 | empty |
| 3 | 85 | 0.40 | 0.78 | 24 | empty |
| 4 | 73 | 0.36 | 0.76 | 20 | empty |
| 5 | 58 | 0.33 | 0.77 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3YV72
- Elsewhere: UniProt Q3YV72 · AlphaFold DB Q3YV72
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