MolNFT v1 · #338990 · protein
AlphaFold monomer V2.0 prediction for hth-type transcriptional regulator lrpa (P42180)
P42180: “AlphaFold monomer V2.0 prediction for hth-type transcriptional regulator lrpa (P42180)”. 1 pocket (best druggability 0.31). MolNFT v1 #338990 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P42180
- Type
- protein
- Length
- 141 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc2C3F148eB26FE91165F4EE55FE4D2E3738B0950
- Molecule
- Hth-type transcriptional regulator lrpa
- UniProt
- P42180
- Pockets
- 1 · best druggability 0.31
Structure
1 distinct chain · 45% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hth-type transcriptional regulator lrpa | protein | 141 | 45% helix, 21% strand | P42180 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 82 | 0.31 | 0.73 | 17 | empty |
Compared structures
- 1I1G · Crystal structure of the lrp-like transcriptional regulator from the archaeon pyrococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 1I1G · Crystal structure of the lrp-like transcriptional regulator from the archaeon pyrococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P42180
- Elsewhere: UniProt P42180 · AlphaFold DB P42180
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