MolNFT v1 · #335747 · protein

AlphaFold monomer V2.0 prediction for burp domain protein RD22 (Q08298)

Q08298: “AlphaFold monomer V2.0 prediction for burp domain protein RD22 (Q08298)”. 6 pockets (best druggability 0.57). MolNFT v1 #335747 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q08298
Type: protein
Length: 392 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x772cDF339c71f2E91A7B5C3137d74bF9134420C6
Molecule: Burp domain protein RD22
UniProt: Q08298
Pockets: 6 · best druggability 0.57

Structure

1 distinct chain · 17% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Burp domain protein RD22	protein	392	17% helix, 29% strand	Q08298

Pockets

6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	103	0.57	0.85	16	empty
2	128	0.53	0.81	27	empty
3	143	0.48	0.78	19	empty
4	93	0.36	0.75	16	empty
5	58	0.33	0.77	16	empty

Modifications

Observed in the structure: 3 disulfide (disulfide).

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q08298
Elsewhere: UniProt Q08298 · AlphaFold DB Q08298

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