MolNFT v1 · #335504 · protein
AlphaFold monomer V2.0 prediction for red chlorophyll catabolite reductase, chloroplastic (Q8LDU4)
Q8LDU4: “AlphaFold monomer V2.0 prediction for red chlorophyll catabolite reductase, chloroplastic (Q8LDU4)”. 2 pockets (best druggability 0.82). MolNFT v1 #335504 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8LDU4
- Type
- protein
- Length
- 319 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3ec41f9b413220A375Ef4910666Ef7e01d098239
- Molecule
- Red chlorophyll catabolite reductase, chloroplastic
- UniProt
- Q8LDU4
- Pockets
- 2 · best druggability 0.82
Structure
1 distinct chain · 42% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Red chlorophyll catabolite reductase, chloroplastic | protein | 319 | 42% helix, 19% strand | Q8LDU4 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 161 | 0.82 | 0.97 | 34 | empty |
| 2 | 68 | 0.29 | 0.73 | 17 | empty |
Compared structures
- 3AGC · F218V mutant of the substrate-bound red chlorophyll catabolite reductase from Arabidopsis… · an experimental structure of the same protein · chain A against A, TM-score 0.84
- 3AGC · F218V mutant of the substrate-bound red chlorophyll catabolite reductase from arabidopsis… · an experimental structure of the same protein · chain A against A, TM-score 0.84
- 3AGB · F218V mutant of the substrate-free form of red chlorophyll catabolite reductase from… · an experimental structure of the same protein · chain A against A, TM-score 0.84
- 3AGB · F218V mutant of the substrate-free form of red chlorophyll catabolite reductase from… · an experimental structure of the same protein · chain A against A, TM-score 0.84
- 3AGA · Crystal structure of RCC-bound red chlorophyll catabolite reductase from Arabidopsis… · an experimental structure of the same protein · chain A against A, TM-score 0.84
- 3AGA · Crystal structure of rcc-bound red chlorophyll catabolite reductase from arabidopsis… · an experimental structure of the same protein · chain A against A, TM-score 0.84
- 2ZXL · Crystal structure of red chlorophyll catabolite reductase from arabidopsis thaliana · an experimental structure of the same protein · chain A against A, TM-score 0.83
- 2ZXL · Crystal structure of red chlorophyll catabolite reductase from Arabidopsis thaliana · an experimental structure of the same protein · chain A against A, TM-score 0.83
- 2ZXK · Crystal structure of SeMet-Red chlorophyll catabolite reductase · an experimental structure of the same protein · chain A against A, TM-score 0.82
- 2ZXK · Crystal structure of semet-red chlorophyll catabolite reductase · an experimental structure of the same protein · chain A against A, TM-score 0.82
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8LDU4
- Elsewhere: UniProt Q8LDU4 · AlphaFold DB Q8LDU4
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