MolNFT v1 · #333996 · protein
AlphaFold monomer V2.0 prediction for rhomboid-like protein 3 (Q9LYP1)
Q9LYP1: “AlphaFold monomer V2.0 prediction for rhomboid-like protein 3 (Q9LYP1)”. 3 pockets (best druggability 0.69). MolNFT v1 #333996 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9LYP1
- Type
- protein
- Length
- 346 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4Ef77Afb5a3D9F41c95Be3227D1CC986CCb61835
- Molecule
- Rhomboid-like protein 3
- UniProt
- Q9LYP1
- Pockets
- 3 · best druggability 0.69
Structure
1 distinct chain · 56% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rhomboid-like protein 3 | protein | 346 | 56% helix, 2% strand | Q9LYP1 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 663 | 0.69 | 0.77 | 53 | empty |
| 2 | 337 | 0.64 | 0.79 | 49 | empty |
| 3 | 149 | 0.47 | 0.77 | 21 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9LYP1
- Elsewhere: UniProt Q9LYP1 · AlphaFold DB Q9LYP1
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