MolNFT v1 · #333026 · protein

AlphaFold monomer V2.0 prediction for RAS-related protein rab-39B (Q96DA2)

Q96DA2: “AlphaFold monomer V2.0 prediction for RAS-related protein rab-39B (Q96DA2)”. 2 pockets (best druggability 0.48). MolNFT v1 #333026 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q96DA2
Type: protein
Length: 213 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x35612D34a32C306CA4fc1edA9360D1F717e25950
Molecule: RAS-related protein rab-39B
UniProt: Q96DA2
Pockets: 2 · best druggability 0.48

Structure

1 distinct chain · 31% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	RAS-related protein rab-39B	protein	213	31% helix, 24% strand	Q96DA2

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	137	0.48	0.78	28	empty
2	62	0.30	0.75	16	empty

Compared structures

6S5F · Structure of the human RAB39B in complex with gmppnp · an experimental structure of the same protein · chain A against A, TM-score 0.87
6S5F · Structure of the human RAB39B in complex with GMPPNP · an experimental structure of the same protein · chain A against A, TM-score 0.87

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q96DA2
Elsewhere: UniProt Q96DA2 · AlphaFold DB Q96DA2

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