MolNFT v1 · #332561 · protein
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (A9L3Y2)
A9L3Y2: “AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (A9L3Y2)”. 15 pockets (best druggability 0.73). MolNFT v1 #332561 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A9L3Y2
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- A9L3Y2
- Pockets
- 15 · best druggability 0.73
Structure
1 distinct chain · 48% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 968 | 48% helix, 18% strand | A9L3Y2 |
Pockets
15 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 558 | 0.73 | 0.81 | 50 | empty |
| 2 | 497 | 0.64 | 0.76 | 52 | empty |
| 3 | 218 | 0.62 | 0.83 | 27 | empty |
| 4 | 209 | 0.59 | 0.81 | 26 | empty |
| 5 | 99 | 0.55 | 0.85 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9L3Y2
- Elsewhere: UniProt A9L3Y2 · AlphaFold DB A9L3Y2
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