MolNFT v1 · #332555 · protein
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (Q8ZRV8)
Q8ZRV8: “AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (Q8ZRV8)”. 9 pockets (best druggability 0.83). MolNFT v1 #332555 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8ZRV8
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- Q8ZRV8
- Pockets
- 9 · best druggability 0.83
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 968 | 47% helix, 18% strand | Q8ZRV8 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 726 | 0.83 | 0.87 | 88 | empty |
| 2 | 921 | 0.79 | 0.81 | 105 | empty |
| 3 | 298 | 0.60 | 0.78 | 45 | empty |
| 4 | 160 | 0.47 | 0.77 | 31 | empty |
| 5 | 103 | 0.43 | 0.78 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8ZRV8
- Elsewhere: UniProt Q8ZRV8 · AlphaFold DB Q8ZRV8
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