MolNFT v1 · #332547 · protein
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (B5R1T4)
B5R1T4: “AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (B5R1T4)”. 12 pockets (best druggability 0.83). MolNFT v1 #332547 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B5R1T4
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x30d872b97D5A8BBB2071246F96F833576bC307D1
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- B5R1T4
- Pockets
- 12 · best druggability 0.83
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 968 | 47% helix, 18% strand | B5R1T4 |
Pockets
12 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 616 | 0.83 | 0.88 | 82 | empty |
| 2 | 936 | 0.78 | 0.80 | 99 | empty |
| 3 | 218 | 0.53 | 0.77 | 36 | empty |
| 4 | 122 | 0.52 | 0.81 | 23 | empty |
| 5 | 183 | 0.51 | 0.77 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5R1T4
- Elsewhere: UniProt B5R1T4 · AlphaFold DB B5R1T4
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